IL_3J7R_205
3D structure
- PDB id
- 3J7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UAU*AGA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J7R_205 not in the Motif Atlas
- Geometric match to IL_3HHN_004
- Geometric discrepancy: 0.1846
- The information below is about IL_3HHN_004
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 214
Unit IDs
3J7R|1|S2|U|943
3J7R|1|S2|A|944
3J7R|1|S2|U|945
*
3J7R|1|S2|A|981
3J7R|1|S2|G|982
3J7R|1|S2|A|983
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain A
- Ribosomal protein uL2
- Chain SB
- Ribosomal protein eS1
- Chain SO
- Ribosomal protein uS11
- Chain p
- Ribosomal protein eL43
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