IL_3J7R_206
3D structure
- PDB id
- 3J7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGCUAG*CUUGGACCG
- Length
- 15 nucleotides
- Bulged bases
- 3J7R|1|S2|G|970
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J7R_206 not in the Motif Atlas
- Geometric match to IL_4LFB_031
- Geometric discrepancy: 0.2803
- The information below is about IL_4LFB_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_95727.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
3J7R|1|S2|C|951
3J7R|1|S2|G|952
3J7R|1|S2|C|953
3J7R|1|S2|U|954
3J7R|1|S2|A|955
3J7R|1|S2|G|956
*
3J7R|1|S2|C|967
3J7R|1|S2|U|968
3J7R|1|S2|U|969
3J7R|1|S2|G|970
3J7R|1|S2|G|971
3J7R|1|S2|A|972
3J7R|1|S2|C|973
3J7R|1|S2|C|974
3J7R|1|S2|G|975
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain A
- Ribosomal protein uL2
- Chain SB
- Ribosomal protein eS1
- Chain SO
- Ribosomal protein uS11
Coloring options: