IL_3J7R_232
3D structure
- PDB id
- 3J7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGCU*AAAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J7R_232 not in the Motif Atlas
- Geometric match to IL_6AZ4_001
- Geometric discrepancy: 0.3202
- The information below is about IL_6AZ4_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_69145.1
- Basepair signature
- cWW-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
3J7R|1|S2|C|1708
3J7R|1|S2|G|1709
3J7R|1|S2|C|1710
3J7R|1|S2|U|1711
*
3J7R|1|S2|A|1822
3J7R|1|S2|A|1823
3J7R|1|S2|A|1824
3J7R|1|S2|A|1825
3J7R|1|S2|G|1826
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain S4
- Messenger RNA
- Chain S5
- Transfer RNA; tRNA
- Chain SX
- Ribosomal protein uS12
- Chain Se
- Ribosomal protein eS30
- Chain n
- Ribosomal protein eL41
Coloring options: