IL_3J7R_239
3D structure
- PDB id
- 3J7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGGAU*AGAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J7R_239 not in the Motif Atlas
- Geometric match to IL_8C3A_480
- Geometric discrepancy: 0.1656
- The information below is about IL_8C3A_480
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_50730.1
- Basepair signature
- cWW-tSH-tSH-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
3J7R|1|S2|C|1742
3J7R|1|S2|G|1743
3J7R|1|S2|G|1744
3J7R|1|S2|A|1745
3J7R|1|S2|U|1746
*
3J7R|1|S2|A|1788
3J7R|1|S2|G|1789
3J7R|1|S2|A|1790
3J7R|1|S2|A|1791
3J7R|1|S2|G|1792
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SG
- Ribosomal protein eS6
- Chain SI
- Ribosomal protein eS8
- Chain W
- Ribosomal protein eL24
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