IL_3J7Y_016

3D structure

PDB id

3J7Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the large ribosomal subunit from human mitochondria

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAA*UUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: GAA,UUC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J7Y_016 not in the Motif Atlas

Geometric match to IL_4V84_420

Geometric discrepancy: 0.2893

The information below is about IL_4V84_420

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_10569.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

3J7Y|1|A|G|2032
3J7Y|1|A|A|2033
3J7Y|1|A|A|2034
*
3J7Y|1|A|U|2041
3J7Y|1|A|U|2042
3J7Y|1|A|C|2043

Current chains

Chain A

16S rRNA

Nearby chains

Chain 3

bL35

Chain M

uL15

Chain W

bL27

Chain i

mL51