3D structure

PDB id
3J7Y (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the large ribosomal subunit from human mitochondria
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
CCCACAG*CCCCUUG
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_33820.1
Basepair signature
cWW-tSH-tSH-R-tHS-cWW-bif-cWW
Number of instances in this motif group
2

Unit IDs

3J7Y|1|A|C|2057
3J7Y|1|A|C|2058
3J7Y|1|A|C|2059
3J7Y|1|A|A|2060
3J7Y|1|A|C|2061
3J7Y|1|A|A|2062
3J7Y|1|A|G|2063
*
3J7Y|1|A|C|2076
3J7Y|1|A|C|2077
3J7Y|1|A|C|2078
3J7Y|1|A|C|2079
3J7Y|1|A|U|2080
3J7Y|1|A|U|2081
3J7Y|1|A|G|2082

Current chains

Chain A
16S rRNA

Nearby chains

Chain 6
mL38
Chain W
bL27
Chain Z
uL30
Chain f
mL48
Chain j
mL52
Chain o
mL63

Coloring options:

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