3D structure

PDB id
3J7Y (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the large ribosomal subunit from human mitochondria
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
CAUAAUCACUUG*CCUG
Length
16 nucleotides
Bulged bases
3J7Y|1|A|A|2601, 3J7Y|1|A|U|2607, 3J7Y|1|A|U|2626
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_62969.1
Basepair signature
cWW-L-R-cHW-L-L-L-L-L-cWW
Number of instances in this motif group
9

Unit IDs

3J7Y|1|A|C|2597
3J7Y|1|A|A|2598
3J7Y|1|A|U|2599
3J7Y|1|A|A|2600
3J7Y|1|A|A|2601
3J7Y|1|A|U|2602
3J7Y|1|A|C|2603
3J7Y|1|A|A|2604
3J7Y|1|A|C|2605
3J7Y|1|A|U|2606
3J7Y|1|A|U|2607
3J7Y|1|A|G|2608
*
3J7Y|1|A|C|2624
3J7Y|1|A|C|2625
3J7Y|1|A|U|2626
3J7Y|1|A|G|2627

Current chains

Chain A
16S rRNA

Nearby chains

No other chains within 10Å

Coloring options:

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