3D structure

PDB id
3J7Y (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the large ribosomal subunit from human mitochondria
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
GUACAUG*CGAACC
Length
13 nucleotides
Bulged bases
None detected
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_26146.1
Basepair signature
cWW-R-R-R-R-cWW-L-L-L-cWW
Number of instances in this motif group
1

Unit IDs

3J7Y|1|A|G|2849
3J7Y|1|A|U|2850
3J7Y|1|A|A|2851
3J7Y|1|A|C|2852
3J7Y|1|A|A|2853
3J7Y|1|A|U|2854
3J7Y|1|A|G|2855
*
3J7Y|1|A|C|2877
3J7Y|1|A|G|2878
3J7Y|1|A|A|2879
3J7Y|1|A|A|2880
3J7Y|1|A|C|2881
3J7Y|1|A|C|2889

Current chains

Chain A
16S rRNA

Nearby chains

Chain 1
bL33
Chain 3
bL35
Chain P
uL18
Chain W
bL27
Chain q
CRIF1
Chain t
unknown protein

Coloring options:

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