IL_3J7Y_053

3D structure

PDB id

3J7Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the large ribosomal subunit from human mitochondria

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AUC*GUGAU

Length

8 nucleotides

Bulged bases

3J7Y|1|A|G|3063, 3J7Y|1|A|A|3064

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J7Y_053 not in the Motif Atlas

Geometric match to IL_4WF9_095

Geometric discrepancy: 0.1623

The information below is about IL_4WF9_095

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_07785.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

33

Unit IDs

3J7Y|1|A|A|2997
3J7Y|1|A|U|2998
3J7Y|1|A|C|2999
*
3J7Y|1|A|G|3061
3J7Y|1|A|U|3062
3J7Y|1|A|G|3063
3J7Y|1|A|A|3064
3J7Y|1|A|U|3065

Current chains

Chain A

16S rRNA

Nearby chains

Chain 0

bL32

Chain E

uL3