IL_3J7Y_062
3D structure
- PDB id
- 3J7Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large ribosomal subunit from human mitochondria
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CUUUG*CUAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J7Y_062 not in the Motif Atlas
- Geometric match to IL_8VM9_004
- Geometric discrepancy: 0.2678
- The information below is about IL_8VM9_004
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
3J7Y|1|A|C|1875
3J7Y|1|A|U|1876
3J7Y|1|A|U|1877
3J7Y|1|A|U|1878
3J7Y|1|A|G|1879
*
3J7Y|1|A|C|1895
3J7Y|1|A|U|1896
3J7Y|1|A|A|1897
3J7Y|1|A|A|1898
3J7Y|1|A|G|1899
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 3
- bL35
- Chain F
- uL4
- Chain M
- uL15
- Chain g
- mL49
- Chain i
- mL51
- Chain o
- mL63
Coloring options: