IL_3J7Z_120

3D structure

PDB id

3J7Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli 50S subunit with ErmCL nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J7Z_120 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.0683

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

3J7Z|1|A|U|1851
3J7Z|1|A|U|1852
3J7Z|1|A|A|1853
3J7Z|1|A|A|1854
3J7Z|1|A|U|1855
3J7Z|1|A|U|1856
3J7Z|1|A|G|1857
3J7Z|1|A|A|1858
3J7Z|1|A|U|1859
3J7Z|1|A|G|1860
*
3J7Z|1|A|U|1882
3J7Z|1|A|U|1883
3J7Z|1|A|G|1884
3J7Z|1|A|A|1885
3J7Z|1|A|U|1886
3J7Z|1|A|C|1887
3J7Z|1|A|G|1888
3J7Z|1|A|A|1889
3J7Z|1|A|A|1890
3J7Z|1|A|G|1891

Current chains

Chain A

23S rRNA

Nearby chains