IL_3J8G_016

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

3J8G|1|B|G|277

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J8G_016 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.5197

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

3J8G|1|B|C|274
3J8G|1|B|C|275
3J8G|1|B|U|276
3J8G|1|B|G|277
3J8G|1|B|A|278
3J8G|1|B|A|279
3J8G|1|B|U|280
3J8G|1|B|C|281
*
3J8G|1|B|G|359
3J8G|1|B|U|360
3J8G|1|B|G|361
3J8G|1|B|A|362
3J8G|1|B|G|363

Current chains

Chain B

23S rRNA

Nearby chains