IL_3J8G_060

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

UG*CAUCAG

Length

8 nucleotides

Bulged bases

3J8G|1|B|U|1584

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J8G_060 not in the Motif Atlas

Homologous match to IL_5J7L_294

Geometric discrepancy: 0.2972

The information below is about IL_5J7L_294

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_87211.1

Basepair signature

cWW-cSW-L-cWW-L

Number of instances in this motif group

1

Unit IDs

3J8G|1|B|U|1415
3J8G|1|B|G|1416
*
3J8G|1|B|C|1582
3J8G|1|B|A|1583
3J8G|1|B|U|1584
3J8G|1|B|C|1585
3J8G|1|B|A|1586
3J8G|1|B|G|1587

Current chains

Chain B

23S rRNA

Nearby chains