IL_3J8G_061

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

3J8G|1|B|A|1420

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J8G_061 not in the Motif Atlas

Homologous match to IL_5J7L_295

Geometric discrepancy: 0.2053

The information below is about IL_5J7L_295

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

3J8G|1|B|C|1417
3J8G|1|B|G|1418
3J8G|1|B|A|1419
3J8G|1|B|A|1420
3J8G|1|B|G|1421
*
3J8G|1|B|C|1577
3J8G|1|B|U|1578
3J8G|1|B|A|1579
3J8G|1|B|A|1580
3J8G|1|B|G|1581

Current chains

Chain B

23S rRNA

Nearby chains