IL_3J8G_069

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

GAGAAC*GAC

Length

9 nucleotides

Bulged bases

3J8G|1|B|G|1653

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J8G_069 not in the Motif Atlas

Homologous match to IL_7RQB_064

Geometric discrepancy: 0.3235

The information below is about IL_7RQB_064

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_12566.2

Basepair signature

cWW-L-tHS-L-cWW-L

Number of instances in this motif group

5

Unit IDs

3J8G|1|B|G|1651
3J8G|1|B|A|1652
3J8G|1|B|G|1653
3J8G|1|B|A|1654
3J8G|1|B|A|1655
3J8G|1|B|C|1656
*
3J8G|1|B|G|2004
3J8G|1|B|A|2005
3J8G|1|B|C|2006

Current chains

Chain B

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain N

50S ribosomal protein L17