IL_3J8G_086
3D structure
- PDB id
- 3J8G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- UAG*UGGG
- Length
- 7 nucleotides
- Bulged bases
- 3J8G|1|B|G|2238
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J8G_086 not in the Motif Atlas
- Homologous match to IL_5J7L_325
- Geometric discrepancy: 0.1567
- The information below is about IL_5J7L_325
- Detailed Annotation
- Isolated tHS basepair with bulges
- Broad Annotation
- No text annotation
- Motif group
- IL_85599.2
- Basepair signature
- cWW-tHS-cWW
- Number of instances in this motif group
- 9
Unit IDs
3J8G|1|B|U|2081
3J8G|1|B|A|2082
3J8G|1|B|G|2083
*
3J8G|1|B|U|2236
3J8G|1|B|G|2237
3J8G|1|B|G|2238
3J8G|1|B|G|2239
Current chains
- Chain B
- 23S rRNA
Nearby chains
- Chain 0
- 50S ribosomal protein L28
- Chain C
- 50S ribosomal protein L2
- Chain X
- GTPase Der
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