IL_3J8G_090
3D structure
- PDB id
- 3J8G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- CGAG*CGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J8G_090 not in the Motif Atlas
- Homologous match to IL_5J7L_333
- Geometric discrepancy: 0.1437
- The information below is about IL_5J7L_333
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.15
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 34
Unit IDs
3J8G|1|B|C|2350
3J8G|1|B|G|2351
3J8G|1|B|A|2352
3J8G|1|B|G|2353
*
3J8G|1|B|C|2364
3J8G|1|B|G|2365
3J8G|1|B|A|2366
3J8G|1|B|G|2367
Current chains
- Chain B
- 23S rRNA
Nearby chains
- Chain 7
- 50S ribosomal protein L35
- Chain Y
- 50S ribosomal protein L27
Coloring options: