IL_3J8G_124

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

AUA*UGUUU

Length

8 nucleotides

Bulged bases

3J8G|1|B|U|2491

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J8G_124 not in the Motif Atlas

Homologous match to IL_9DFE_094

Geometric discrepancy: 0.2455

The information below is about IL_9DFE_094

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_36931.2

Basepair signature

cWW-cSH-cWW-cWW

Number of instances in this motif group

24

Unit IDs

3J8G|1|B|A|2459
3J8G|1|B|U|2460
3J8G|1|B|A|2461
*
3J8G|1|B|U|2489
3J8G|1|B|G|2490
3J8G|1|B|U|2491
3J8G|1|B|U|2492
3J8G|1|B|U|2493

Current chains

Chain B

23S rRNA

Nearby chains

Chain M

50S ribosomal protein L16

Chain X

GTPase Der