IL_3J92_037

3D structure

PDB id

3J92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure and assembly pathway of the ribosome quality control complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAAGG*CAGCAGCACUC

Length

16 nucleotides

Bulged bases

3J92|1|5|G|933, 3J92|1|5|C|936

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J92|1|5|G|731
3J92|1|5|A|732
3J92|1|5|A|733
3J92|1|5|G|734
3J92|1|5|G|735
*
3J92|1|5|C|928
3J92|1|5|A|929
3J92|1|5|G|930
3J92|1|5|C|931
3J92|1|5|A|932
3J92|1|5|G|933
3J92|1|5|C|934
3J92|1|5|A|935
3J92|1|5|C|936
3J92|1|5|U|937
3J92|1|5|C|938

Current chains

Chain 5

28S rRNA

Nearby chains

Chain C

uL4

Chain M

eL14

Chain S

eL20