IL_3J92_066

3D structure

PDB id

3J92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure and assembly pathway of the ribosome quality control complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUCGCACACGCAGU*AAUGG

Length

19 nucleotides

Bulged bases

3J92|1|5|G|1697, 3J92|1|5|C|1698, 3J92|1|5|A|1699, 3J92|1|5|C|1718, 3J92|1|5|A|1719, 3J92|1|5|G|1724

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J92|1|5|C|1694
3J92|1|5|U|1695
3J92|1|5|C|1696
3J92|1|5|G|1697
3J92|1|5|C|1698
3J92|1|5|A|1699
3J92|1|5|C|1718
3J92|1|5|A|1719
3J92|1|5|C|1720
3J92|1|5|G|1721
3J92|1|5|C|1722
3J92|1|5|A|1723
3J92|1|5|G|1724
3J92|1|5|U|1725
*
3J92|1|5|A|1837
3J92|1|5|A|1838
3J92|1|5|U|1839
3J92|1|5|G|1840
3J92|1|5|G|1842

Current chains

Chain 5

28S rRNA

Nearby chains

Chain C

uL4

Chain F

eL30

Chain Q

eL18

Chain T

eL21

Chain b

eL29