3D structure

PDB id
3J9M (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the human mitochondrial ribosome (class 1)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
CCCACAG*CCCCUUG
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J9M|1|A|C|2057
3J9M|1|A|C|2058
3J9M|1|A|C|2059
3J9M|1|A|A|2060
3J9M|1|A|C|2061
3J9M|1|A|A|2062
3J9M|1|A|G|2063
*
3J9M|1|A|C|2076
3J9M|1|A|C|2077
3J9M|1|A|C|2078
3J9M|1|A|C|2079
3J9M|1|A|U|2080
3J9M|1|A|U|2081
3J9M|1|A|G|2082

Current chains

Chain A
16S rRNA

Nearby chains

Chain 6
mL38
Chain W
bL27m
Chain Z
uL30m
Chain f
mL48
Chain j
mL52
Chain o
mL63

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0883 s