IL_3J9M_024

3D structure

PDB id

3J9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome (class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GAAA*UC

Length

6 nucleotides

Bulged bases

3J9M|1|A|A|2198

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J9M_024 not in the Motif Atlas

Homologous match to IL_6PRV_002

Geometric discrepancy: 0.1837

The information below is about IL_6PRV_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9M|1|A|G|2197
3J9M|1|A|A|2198
3J9M|1|A|A|2199
3J9M|1|A|A|2200
*
3J9M|1|A|U|2211
3J9M|1|A|C|2212

Current chains

Chain A

16S rRNA

Nearby chains

Chain 4

bL36m

Chain J

uL11m

Chain N

uL16m

Chain l

mL54