IL_3J9M_046
3D structure
- PDB id
- 3J9M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome (class 1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUAAG*CAAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J9M_046 not in the Motif Atlas
- Geometric match to IL_5J7L_274
- Geometric discrepancy: 0.1998
- The information below is about IL_5J7L_274
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
3J9M|1|A|C|2856
3J9M|1|A|U|2857
3J9M|1|A|A|2858
3J9M|1|A|A|2859
3J9M|1|A|G|2860
*
3J9M|1|A|C|2872
3J9M|1|A|A|2873
3J9M|1|A|A|2874
3J9M|1|A|A|2875
3J9M|1|A|G|2876
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 1
- bL33m
- Chain 3
- bL35m
- Chain 6
- mL38
- Chain P
- uL18m
- Chain W
- bL27m
Coloring options: