IL_3J9M_074

3D structure

PDB id

3J9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome (class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGGUCAAUUU*AUUA

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_81022.1

Basepair signature

cWW-L-L-L-cSH-L-cWW-cWW-cWW

Number of instances in this motif group

1

Unit IDs

3J9M|1|AA|U|876
3J9M|1|AA|G|877
3J9M|1|AA|G|878
3J9M|1|AA|U|879
3J9M|1|AA|C|880
3J9M|1|AA|A|881
3J9M|1|AA|A|882
3J9M|1|AA|U|883
3J9M|1|AA|U|884
3J9M|1|AA|U|885
*
3J9M|1|AA|A|910
3J9M|1|AA|U|911
3J9M|1|AA|U|912
3J9M|1|AA|A|913

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AD

uS5m

Chain AJ

uS12m

Chain AO

mS40 (bS18b)

Chain AZ

mS33