IL_3J9M_077

3D structure

PDB id

3J9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome (class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UUUUA*UGAACA

Length

11 nucleotides

Bulged bases

3J9M|1|AA|A|1047, 3J9M|1|AA|C|1048

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_46075.1

Basepair signature

cWW-L-R-L-tHS-cWW

Number of instances in this motif group

1

Unit IDs

3J9M|1|AA|U|946
3J9M|1|AA|U|947
3J9M|1|AA|U|948
3J9M|1|AA|U|949
3J9M|1|AA|A|950
*
3J9M|1|AA|U|1044
3J9M|1|AA|G|1045
3J9M|1|AA|A|1046
3J9M|1|AA|A|1047
3J9M|1|AA|C|1048
3J9M|1|AA|A|1049

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AJ

uS12m

Chain AL

uS15m

Chain AN

uS17m

Chain AT

mS25