IL_3J9M_085

3D structure

PDB id

3J9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome (class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AACACUACG*UAAAACU

Length

16 nucleotides

Bulged bases

3J9M|1|AA|C|1143

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_36529.1

Basepair signature

cWW-L-R-tSH-tHH-tWH-tHS-L-cWW

Number of instances in this motif group

1

Unit IDs

3J9M|1|AA|A|1139
3J9M|1|AA|A|1140
3J9M|1|AA|C|1141
3J9M|1|AA|A|1142
3J9M|1|AA|C|1143
3J9M|1|AA|U|1144
3J9M|1|AA|A|1145
3J9M|1|AA|C|1146
3J9M|1|AA|G|1147
*
3J9M|1|AA|U|1158
3J9M|1|AA|A|1159
3J9M|1|AA|A|1160
3J9M|1|AA|A|1161
3J9M|1|AA|A|1162
3J9M|1|AA|C|1163
3J9M|1|AA|U|1164

Current chains

Chain AA

12S rRNA

Nearby chains

Chain A3

mS38

Chain AJ

uS12m

Chain AL

uS15m