IL_3J9M_088

3D structure

PDB id

3J9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome (class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AUAUC*GCCCU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_53699.1

Basepair signature

cWW-tHW-L-L-L-cSW-R-cWW

Number of instances in this motif group

2

Unit IDs

3J9M|1|AA|A|1186
3J9M|1|AA|U|1187
3J9M|1|AA|A|1188
3J9M|1|AA|U|1189
3J9M|1|AA|C|1190
*
3J9M|1|AA|G|1464
3J9M|1|AA|C|1465
3J9M|1|AA|C|1466
3J9M|1|AA|C|1467
3J9M|1|AA|U|1468

Current chains

Chain AA

12S rRNA

Nearby chains

Chain A2

mS37

Chain AF

uS7m

Chain AG

uS9m