IL_3J9M_090

3D structure

PDB id

3J9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome (class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUUGCUCAG*CCCAUG

Length

15 nucleotides

Bulged bases

3J9M|1|AA|C|1250, 3J9M|1|AA|U|1344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_19895.1

Basepair signature

cWW-L-R-R-L-L-L-L-tHS-cWW

Number of instances in this motif group

1

Unit IDs

3J9M|1|AA|C|1244
3J9M|1|AA|U|1245
3J9M|1|AA|U|1246
3J9M|1|AA|G|1247
3J9M|1|AA|C|1248
3J9M|1|AA|U|1249
3J9M|1|AA|C|1250
3J9M|1|AA|A|1251
3J9M|1|AA|G|1252
*
3J9M|1|AA|C|1340
3J9M|1|AA|C|1341
3J9M|1|AA|C|1342
3J9M|1|AA|A|1343
3J9M|1|AA|U|1344
3J9M|1|AA|G|1345

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AD

uS5m

Chain AK

uS14m

Chain AZ

mS33