3D structure

PDB id
3J9M (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the human mitochondrial ribosome (class 1)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
CCG*CAUG
Length
7 nucleotides
Bulged bases
3J9M|1|AA|C|1484, 3J9M|1|AA|U|1568
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_74275.1
Basepair signature
cWW-R-cWW
Number of instances in this motif group
11

Unit IDs

3J9M|1|AA|C|1483
3J9M|1|AA|C|1484
3J9M|1|AA|G|1485
*
3J9M|1|AA|C|1566
3J9M|1|AA|A|1567
3J9M|1|AA|U|1568
3J9M|1|AA|G|1569

Current chains

Chain AA
12S rRNA

Nearby chains

Chain A3
mS38

Coloring options:

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