IL_3J9M_100

3D structure

PDB id

3J9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome (class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GCCC*GUAAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_99283.1

Basepair signature

cWW-cWW-cSW-cWW-cSH-cWW

Number of instances in this motif group

19

Unit IDs

3J9M|1|AA|G|1485
3J9M|1|AA|C|1486
3J9M|1|AA|C|1487
3J9M|1|AA|C|1488
*
3J9M|1|AA|G|1562
3J9M|1|AA|U|1563
3J9M|1|AA|A|1564
3J9M|1|AA|A|1565
3J9M|1|AA|C|1566

Current chains

Chain AA

12S rRNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain A3

mS38