IL_3J9M_103

3D structure

PDB id

3J9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome (class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CAAGU*AUAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_73934.1

Basepair signature

cWW-R-tWH-tHS-cWW

Number of instances in this motif group

17

Unit IDs

3J9M|1|AA|C|1500
3J9M|1|AA|A|1501
3J9M|1|AA|A|1502
3J9M|1|AA|G|1503
3J9M|1|AA|U|1504
*
3J9M|1|AA|A|1546
3J9M|1|AA|U|1547
3J9M|1|AA|A|1548
3J9M|1|AA|G|1549

Current chains

Chain AA

12S rRNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain A3

mS38

Chain L

uL14m