IL_3J9M_106

3D structure

PDB id

3J9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome (class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CAAA*UACG

Length

8 nucleotides

Bulged bases

3J9M|1|AA|A|1513

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_41288.1

Basepair signature

cWW-L-R-R-cWW

Number of instances in this motif group

1

Unit IDs

3J9M|1|AA|C|1511
3J9M|1|AA|A|1512
3J9M|1|AA|A|1513
3J9M|1|AA|A|1514
*
3J9M|1|AA|U|1535
3J9M|1|AA|A|1536
3J9M|1|AA|C|1537
3J9M|1|AA|G|1538

Current chains

Chain AA

12S rRNA

Nearby chains

Chain A0

mS34

Chain A3

mS38

Chain AL

uS15m

Chain L

uL14m

Chain Q

bL19m