IL_3J9W_033

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GGAGUACG*UGAAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68313.1

Basepair signature

cWW-tSH-tHH-cSH-tWH-tHS-L-cWW

Number of instances in this motif group

9

Unit IDs

3J9W|1|AA|G|897
3J9W|1|AA|G|898
3J9W|1|AA|A|899
3J9W|1|AA|G|900
3J9W|1|AA|U|901
3J9W|1|AA|A|902
3J9W|1|AA|C|903
3J9W|1|AA|G|904
*
3J9W|1|AA|U|915
3J9W|1|AA|G|916
3J9W|1|AA|A|917
3J9W|1|AA|A|918
3J9W|1|AA|A|919
3J9W|1|AA|C|920

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AL

30S ribosomal protein uS12