IL_3J9W_051

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CGGAUC*GUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85140.1

Basepair signature

cWW-cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

11

Unit IDs

3J9W|1|AA|C|1312
3J9W|1|AA|G|1313
3J9W|1|AA|G|1314
3J9W|1|AA|A|1315
3J9W|1|AA|U|1316
3J9W|1|AA|C|1317
*
3J9W|1|AA|G|1338
3J9W|1|AA|U|1339
3J9W|1|AA|G|1340
3J9W|1|AA|A|1341
3J9W|1|AA|A|1342
3J9W|1|AA|G|1343

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AM

30S ribosomal protein uS13