IL_3J9W_083

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GAAAC*GAGAUAGC

Length

13 nucleotides

Bulged bases

3J9W|1|BA|G|848, 3J9W|1|BA|G|852

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28684.1

Basepair signature

cWW-R-tHW-tHW-tWW-cWW

Number of instances in this motif group

12

Unit IDs

3J9W|1|BA|G|721
3J9W|1|BA|A|722
3J9W|1|BA|A|723
3J9W|1|BA|A|724
3J9W|1|BA|C|725
*
3J9W|1|BA|G|846
3J9W|1|BA|A|847
3J9W|1|BA|G|848
3J9W|1|BA|A|849
3J9W|1|BA|U|850
3J9W|1|BA|A|851
3J9W|1|BA|G|852
3J9W|1|BA|C|853

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BF

50S ribosomal protein uL4

Chain BO

50S ribosomal protein uL15