IL_3J9W_101

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UCCCAAAG*CA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_12582.1

Basepair signature

cWW-L-L-L-cSH-L-cWW

Number of instances in this motif group

17

Unit IDs

3J9W|1|BA|U|1050
3J9W|1|BA|C|1051
3J9W|1|BA|C|1052
3J9W|1|BA|C|1053
3J9W|1|BA|A|1054
3J9W|1|BA|A|1055
3J9W|1|BA|A|1056
3J9W|1|BA|G|1057
*
3J9W|1|BA|C|1196
3J9W|1|BA|A|1197

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BM

50S ribosomal protein uL13

Chain BT

50S ribosomal protein bL20