IL_3J9W_107

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUUG*CACC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_83534.1

Basepair signature

cWW-L-R-R-L-cWW

Number of instances in this motif group

1

Unit IDs

3J9W|1|BA|G|1105
3J9W|1|BA|U|1106
3J9W|1|BA|U|1107
3J9W|1|BA|G|1108
*
3J9W|1|BA|C|1122
3J9W|1|BA|A|1123
3J9W|1|BA|C|1124
3J9W|1|BA|C|1125

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BJ

50S ribosomal protein uL10

Chain BK

50S ribosomal protein uL11

Chain BP

50S ribosomal protein uL16