IL_3J9W_154

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GGAG*CAUCGGUGGGAUAC

Length

18 nucleotides

Bulged bases

3J9W|1|BA|U|2196, 3J9W|1|BA|G|2198

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_83013.1

Basepair signature

cWW-tSH-L-R-R-R-R-R-R-R-R-R-cWW

Number of instances in this motif group

1

Unit IDs

3J9W|1|BA|G|2153
3J9W|1|BA|G|2154
3J9W|1|BA|A|2155
3J9W|1|BA|G|2156
*
3J9W|1|BA|C|2190
3J9W|1|BA|A|2191
3J9W|1|BA|U|2192
3J9W|1|BA|C|2193
3J9W|1|BA|G|2194
3J9W|1|BA|G|2195
3J9W|1|BA|U|2196
3J9W|1|BA|G|2197
3J9W|1|BA|G|2198
3J9W|1|BA|G|2199
3J9W|1|BA|A|2200
3J9W|1|BA|U|2201
3J9W|1|BA|A|2202
3J9W|1|BA|C|2203

Current chains

Chain BA

23S ribosomal RNA

Nearby chains