IL_3J9W_157

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CAG*CGCAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05917.1

Basepair signature

cWW-L-R-R-R-cWW

Number of instances in this motif group

1

Unit IDs

3J9W|1|BA|C|2326
3J9W|1|BA|A|2327
3J9W|1|BA|G|2328
*
3J9W|1|BA|C|2346
3J9W|1|BA|G|2347
3J9W|1|BA|C|2348
3J9W|1|BA|A|2349
3J9W|1|BA|G|2350

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BB

5S ribosomal RNA; 5S rRNA

Chain BG

50S ribosomal protein uL5

Chain BR

50S ribosomal protein uL18