IL_3J9W_172

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCGCU*AUG

Length

8 nucleotides

Bulged bases

3J9W|1|BA|U|2755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42675.1

Basepair signature

cWW-tWH-cSH-L-cWS-cWW

Number of instances in this motif group

38

Unit IDs

3J9W|1|BA|C|2709
3J9W|1|BA|C|2710
3J9W|1|BA|G|2711
3J9W|1|BA|C|2712
3J9W|1|BA|U|2713
*
3J9W|1|BA|A|2754
3J9W|1|BA|U|2755
3J9W|1|BA|G|2756

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BE

50S ribosomal protein uL3

Chain BN

50S ribosomal protein uL14

Chain BS

50S ribosomal protein bL19