IL_3J9W_173

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGUAC*GGUAG

Length

10 nucleotides

Bulged bases

3J9W|1|BA|U|2718, 3J9W|1|BA|A|2719

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_78703.1

Basepair signature

cWW-tSH-R-R-cWW

Number of instances in this motif group

5

Unit IDs

3J9W|1|BA|U|2716
3J9W|1|BA|G|2717
3J9W|1|BA|U|2718
3J9W|1|BA|A|2719
3J9W|1|BA|C|2720
*
3J9W|1|BA|G|2747
3J9W|1|BA|G|2748
3J9W|1|BA|U|2749
3J9W|1|BA|A|2750
3J9W|1|BA|G|2751

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BE

50S ribosomal protein uL3

Chain BQ

50S ribosomal protein bL17

Chain BS

50S ribosomal protein bL19