IL_3J9W_178

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGGAAG*UGGAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_79493.1

Basepair signature

cWW-tSH-L-R-L-tHH-cWW

Number of instances in this motif group

7

Unit IDs

3J9W|1|BA|U|2872
3J9W|1|BA|G|2873
3J9W|1|BA|G|2874
3J9W|1|BA|A|2875
3J9W|1|BA|A|2876
3J9W|1|BA|G|2877
*
3J9W|1|BA|U|2890
3J9W|1|BA|G|2891
3J9W|1|BA|G|2892
3J9W|1|BA|A|2893
3J9W|1|BA|G|2894

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BQ

50S ribosomal protein bL17

Chain BS

50S ribosomal protein bL19