IL_3J9W_185
3D structure
- PDB id
- 3J9W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UAGU*AG
- Length
- 6 nucleotides
- Bulged bases
- 3J9W|1|AA|G|259
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J9W_185 not in the Motif Atlas
- Homologous match to IL_4LFB_012
- Geometric discrepancy: 0.1956
- The information below is about IL_4LFB_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22002.1
- Basepair signature
- cWW-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
3J9W|1|AA|U|257
3J9W|1|AA|A|258
3J9W|1|AA|G|259
3J9W|1|AA|U|260
*
3J9W|1|AA|A|282
3J9W|1|AA|G|283
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AQ
- 30S ribosomal protein uS17
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