IL_3J9W_186

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GGAAGAACAA*UUGACGGUAC

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9W|1|AA|G|454
3J9W|1|AA|G|455
3J9W|1|AA|A|456
3J9W|1|AA|A|457
3J9W|1|AA|G|458
3J9W|1|AA|A|459
3J9W|1|AA|A|460
3J9W|1|AA|C|461
3J9W|1|AA|A|462
3J9W|1|AA|A|463
*
3J9W|1|AA|U|488
3J9W|1|AA|U|489
3J9W|1|AA|G|490
3J9W|1|AA|A|491
3J9W|1|AA|C|492
3J9W|1|AA|G|493
3J9W|1|AA|G|494
3J9W|1|AA|U|495
3J9W|1|AA|A|496
3J9W|1|AA|C|497

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AP

30S ribosomal protein bS16