IL_3J9W_189

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UCUGACAAU*ACGUCCCCUUCGGGGGCAGA

Length

29 nucleotides

Bulged bases

3J9W|1|AA|U|1040, 3J9W|1|AA|C|1041

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9W|1|AA|U|1010
3J9W|1|AA|C|1011
3J9W|1|AA|U|1012
3J9W|1|AA|G|1013
3J9W|1|AA|A|1014
3J9W|1|AA|C|1015
3J9W|1|AA|A|1016
3J9W|1|AA|A|1017
3J9W|1|AA|U|1018
*
3J9W|1|AA|A|1031
3J9W|1|AA|C|1032
3J9W|1|AA|G|1033
3J9W|1|AA|U|1034
3J9W|1|AA|C|1035
3J9W|1|AA|C|1036
3J9W|1|AA|C|1037
3J9W|1|AA|C|1038
3J9W|1|AA|U|1039
3J9W|1|AA|U|1040
3J9W|1|AA|C|1041
3J9W|1|AA|G|1042
3J9W|1|AA|G|1043
3J9W|1|AA|G|1044
3J9W|1|AA|G|1045
3J9W|1|AA|G|1046
3J9W|1|AA|C|1047
3J9W|1|AA|A|1048
3J9W|1|AA|G|1049
3J9W|1|AA|A|1050

Current chains

Chain AA

16S ribosomal RNA

Nearby chains