IL_3J9Y_052

3D structure

PDB id

3J9Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GCGAAG*CUAAGC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9Y|1|A|G|1416
3J9Y|1|A|C|1417
3J9Y|1|A|G|1418
3J9Y|1|A|A|1419
3J9Y|1|A|A|1420
3J9Y|1|A|G|1421
*
3J9Y|1|A|C|1577
3J9Y|1|A|U|1578
3J9Y|1|A|A|1579
3J9Y|1|A|A|1580
3J9Y|1|A|G|1581
3J9Y|1|A|C|1582

Current chains

Chain A

23S ribosomal RNA

Nearby chains