IL_3J9Z_054

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

3J9Z|1|LA|A|1420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J9Z_054 not in the Motif Atlas

Homologous match to IL_5J7L_295

Geometric discrepancy: 0.1768

The information below is about IL_5J7L_295

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

3J9Z|1|LA|C|1417
3J9Z|1|LA|G|1418
3J9Z|1|LA|A|1419
3J9Z|1|LA|A|1420
3J9Z|1|LA|G|1421
*
3J9Z|1|LA|C|1577
3J9Z|1|LA|U|1578
3J9Z|1|LA|A|1579
3J9Z|1|LA|A|1580
3J9Z|1|LA|G|1581

Current chains

Chain LA

23S ribosomal RNA

Nearby chains