IL_3J9Z_063

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAA*UCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J9Z_063 not in the Motif Atlas

Homologous match to IL_4WF9_063

Geometric discrepancy: 0.1237

The information below is about IL_4WF9_063

Detailed Annotation

Isolated tWW turn

Broad Annotation

No text annotation

Motif group

IL_67095.2

Basepair signature

cWW-tWW-cWW

Number of instances in this motif group

8

Unit IDs

3J9Z|1|LA|G|1663
3J9Z|1|LA|A|1664
3J9Z|1|LA|A|1665
*
3J9Z|1|LA|U|1995
3J9Z|1|LA|C|1996
3J9Z|1|LA|C|1997

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain LG

50S ribosomal protein L14

Chain LM

50S ribosomal protein L19

Chain LX

50S ribosomal protein L3