IL_3J9Z_086

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUGUAGGAUAGGUG*CACCC

Length

19 nucleotides

Bulged bases

3J9Z|1|LA|U|2111, 3J9Z|1|LA|U|2118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9Z|1|LA|G|2110
3J9Z|1|LA|U|2111
3J9Z|1|LA|G|2112
3J9Z|1|LA|U|2113
3J9Z|1|LA|A|2114
3J9Z|1|LA|G|2115
3J9Z|1|LA|G|2116
3J9Z|1|LA|A|2117
3J9Z|1|LA|U|2118
3J9Z|1|LA|A|2119
3J9Z|1|LA|G|2120
3J9Z|1|LA|G|2121
3J9Z|1|LA|U|2122
3J9Z|1|LA|G|2123
*
3J9Z|1|LA|C|2175
3J9Z|1|LA|A|2176
3J9Z|1|LA|C|2177
3J9Z|1|LA|C|2178
3J9Z|1|LA|C|2179

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain LC

50S ribosomal protein L1

Chain S7

Transfer RNA; tRNA

Chain SK

30S ribosomal protein S11