IL_3J9Z_087

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGAGG*CCGACCUUGAAAUAC

Length

20 nucleotides

Bulged bases

3J9Z|1|LA|C|2164

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9Z|1|LA|G|2124
3J9Z|1|LA|G|2125
3J9Z|1|LA|A|2126
3J9Z|1|LA|G|2127
3J9Z|1|LA|G|2128
*
3J9Z|1|LA|C|2160
3J9Z|1|LA|C|2161
3J9Z|1|LA|G|2162
3J9Z|1|LA|A|2163
3J9Z|1|LA|C|2164
3J9Z|1|LA|C|2165
3J9Z|1|LA|U|2166
3J9Z|1|LA|U|2167
3J9Z|1|LA|G|2168
3J9Z|1|LA|A|2169
3J9Z|1|LA|A|2170
3J9Z|1|LA|A|2171
3J9Z|1|LA|U|2172
3J9Z|1|LA|A|2173
3J9Z|1|LA|C|2174

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain LC

50S ribosomal protein L1

Chain S7

Transfer RNA; tRNA